Assuring Accuracy in Enzyme-Substrate Interactions
Proteins called enzymes are essential components of many biochemical processes in the cells. By binding to substrates, enzymes facilitate biochemical reaction and can catalyze reactions to make the substrate a product. To maintain the cells’ metabolic health, it is important to ensure that enzyme-substrate interactions are accurate. There are several strategies that can be used to ensure the exactness of such interactions.
To better understand binding mechanisms between enzymes and substrates, one strategy is enzyme-substrate Docking Simulations (Kumar, Wang, et. al. 2019; Wang, et. al. 2020). These simulations have allowed researchers to get a better understanding of the enzyme-substrate interactions, which has helped them design more effective enzymes and substrates in biotechnology. Simulators can also be used to predict binding affinity and determine which positions are most favorable for enzymes to interact with substrates (Kumar, et al. 2019, 2019). Mutagenesis is another strategy to modify the amino acids sequences of enzymes or substrates to increase the precision of enzyme-substrate interactions (Zhang and al. 2016; Li et. al., 2021). Researchers can alter the form of the enzyme/substrate to enable better binding by inserting mutations in the sequence. Cont….
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